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Consider the dataset Data-A1b.csv with n = 100 four-dimensional observations. (i) [4 marks] Fit a g-component normal mixture model with a common covariance matrix for its fourdimensional components for g = 1, g = 2, and g = 3. Plot the clusters obtained for g = 2 and g = 3 in separate figures, displaying two of the variables at a time in each plot. use mclust of R studio

Question

Consider the dataset Data-A1b.csv with n = 100 four-dimensional observations. (i) [4 marks] Fit a g-component normal mixture model with a common covariance matrix for its fourdimensional components for g = 1, g = 2, and g = 3. Plot the clusters obtained for g = 2 and g = 3 in separate figures, displaying two of the variables at a time in each plot. use mclust of R studio

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Solution

To fit a g-component normal mixture model with a common covariance matrix for its four-dimensional components for g = 1, g = 2, and g = 3, and plot the clusters obtained for g = 2 and g = 3 in separate figures, you can follow these steps:

  1. Import the data: Load the dataset "Data-A1b.csv" into RStudio using the read.csv() function. Make sure the file is in the working directory or provide the full path to the file.
data <- read.csv("Data-A1b.csv")
  1. Install and load the required packages: Install the mclust package if you haven't already. Then, load the package using the library() function.
install.packages("mclust")
library(mclust)
  1. Fit the g-component normal mixture model: Use the Mclust() function from the mclust package to fit the mixture model to the data. Specify the number of components (G = 1, 2, 3) and the common covariance matrix (modelNames = "EII").
fit1 <- Mclust(data, G = 1, modelNames = "EII")
fit2 <- Mclust(data, G = 2, modelNames = "EII")
fit3 <- Mclust(data, G = 3, modelNames = "EII")
  1. Plot the clusters for g = 2 and g = 3: Use the plot() function to create scatter plots of the clusters. Display two of the variables at a time in each plot. For example, if your data has four variables named V1, V2, V3, and V4, you can create plots of V1 vs V2, V1 vs V3, and V1 vs V4.
# For g = 2
plot(data$V1, data$V2, col = fit2$classification)
plot(data$V1, data$V3, col = fit2$classification)
plot(data$V1, data$V4, col = fit2$classification)

# For g = 3
plot(data$V1, data$V2, col = fit3$classification)
plot(data$V1, data$V3, col = fit3$classification)
plot(data$V1, data$V4, col = fit3$classification)
  1. Customize the plots: Add labels, legends, and any other desired customization to the plots.
# For g = 2
legend("topright", legend = c("Cluster 1", "Cluster 2"), col = 1:2, pch = 1)

# For g = 3
legend("topright", legend = c("Cluster 1", "Cluster 2", "Cluster 3"), col = 1:3, pch = 1)

That's it! You should now have plots showing the clusters obtained for g = 2 and g = 3. Adjust the code as needed based on your specific dataset and requirements.

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