Write a code for reading FASTA sequence with Bio.Fasta package
Question
Write a code for reading FASTA sequence with Bio.Fasta package
Solution
Sure, here is a simple Python code snippet using the BioPython package to read a FASTA file:
from Bio import SeqIO
def read_fasta_file(file_path):
for record in SeqIO.parse(file_path, "fasta"):
print("ID: ", record.id)
print("Sequence: ", record.seq)
print("Length: ", len(record))
# Call the function with your fasta file path
read_fasta_file("your_file_path.fasta")
This code will print the ID, sequence, and length of each record in the FASTA file. Replace "your_file_path.fasta" with the path to your actual FASTA file.
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